After activating "File (Field) Paths" and saving the settings for a (file|image) field, the settings "file_directory" is set to the value entered in the ffp-settings ("file_path").
Modules, relying on "file_directory" (e.g. "Media") therefore fail to upload the files into the correct directories.
Any suggestions on how to fix this? At the moment I undo
$form['instance']['settings']['file_directory']['#access'] = FALSE; (filefield_paths.module L26) in a custom module to allow entering the directory.