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Right now there is no proper paging within a topic itself. On the topic list page, and the forum list page, paging works fine. This is because the advanced_forum_preprocess_advanced_forum_topic_header() method isn't properly initializing paging for the topic itself.
To fix this (Line 446):
// Pager pager_default_initialize($variables['node']->comment_count, variable_get('comment_default_per_page_' . $variables['node']->type)); $variables['pager'] = theme('pager');