mica 7.x-1.10

The release includes the following improvements:

• new study catalog format
• study publication workflow
• Drupal core and module dependencies upgrade

Bug

• [MICA-220] - Mica Demo - Publication breadcrumbs
• [MICA-222] - Site search error
• [MICA-226] - Mica relation can only be applied to content types with 'mica' as a base.
• [MICA-227] - Mica relation expects an index even if no index is selected in the relation
• [MICA-255] - Undefined index: version in l10n_update_build_projects()
• [MICA-260] - Cannot install Mica in French
• [MICA-274] - Update field_description_import.csv in mica standard profile
• [MICA-278] - Clear Age min/max, country values, etc... if these criteria are not selected in study form
• [MICA-279] - Contact & Investigator details in study view
• [MICA-280] - Validate that all study field are displayed in study view page
• [MICA-281] - Cannot create a study for a specific language
• [MICA-284] - Rename field field_current_sam_supp_indo to field_current_sam_supp_info
• [MICA-286] - Make country selection criteria multiple
• [MICA-288] - Display draft embedded contact in draft study view
• [MICA-290] - Broken references to fields in data_access, datasets, projects, field_description and studies views
• [MICA-295] - Warning: htmlspecialchars() when indexing studies
• [MICA-297] - Investigators: this post can't be referenced.
• [MICA-299] - Traduction en français (texte sous l'onglet études)
• [MICA-304] - Contacts: this post can't be referenced.
• [MICA-305] - Methods section: Target number of participants (Add an indication: no space allowed)
• [MICA-306] - Notice: Undefined index: field_no_limits_samples
• [MICA-307] - Selection criteria: Specify country of residence
• [MICA-309] - Study end year too small
• [MICA-310] - Undefined index: field_baseline_start_year in _mica_studies_display_status_dates()
• [MICA-311] - Increase size of mica_dataset_connector table name column
• [MICA-312] - Dataset self id is not added as an argument to dataset studies view
• [MICA-313] - Error when importing dataset variables: jsonpath-0.8.1.php file is not found
• [MICA-314] - Studies Search - facette Headline number of participants - "saisie" d'un nombre
• [MICA-322] - Fix css for country selection list
• [MICA-323] - Implement "longitudinal" datasources
• [MICA-334] - Hide language dropdown for a study
• [MICA-336] - Disable on change submit for ranges facet
• [MICA-337] - Study countries not saved anymore
• [MICA-339] - Index contact name as full text
• [MICA-340] - Data too long
• [MICA-341] - Notice: Undefined index: field_website in SearchApiViewsHandlerFilterFulltext->getFulltextFields()
• [MICA-342] - Study import Feeds seems to not link contacts
• [MICA-343] - Mica logo during Mica install
• [MICA-344] - Contact view: hide commitee access member if false
• [MICA-347] - Add study design column for study list page
• [MICA-348] - Display Authorizations as a collapsed field set by default
• [MICA-349] - Remove 'User may translate this field'
• [MICA-350] - Fix menu/breadcrums for studies
• [MICA-351] - Study draft view is overridden by the published page
• [MICA-353] - Fieldset box for maker paper / pubmedId + authorization + supp. info
• [MICA-354] - Full text index for checkboxes values (selection criteria) and all textual fields
• [MICA-357] - Data Sources
• [MICA-358] - Selection criteria display
• [MICA-359] - Remove mica_seven theme
• [MICA-360] - Ranges facets - max value + 1
• [MICA-362] - Site search
• [MICA-363] - Studies pages
• [MICA-364] - Fix Mica demo studies import
• [MICA-365] - Contact view page
• [MICA-366] - Publication view page CSS
• [MICA-367] - Reduce Mica logo height
• [MICA-368] - Notice: Undefined index: name in _field_ui_reduce_order() (line 81 of /home/cthiebault/workspace/mica/target/mica-1.1-SNAPSHOT/modules/field_ui/field_ui.admin.inc).
• [MICA-369] - Don't apply specific display tweaks to draft study display
• [MICA-371] - Missing gender in study CSV export
• [MICA-372] - Studies Search: Bug in Open cases From and To
• [MICA-374] - hide Field Description section for Link fields
• [MICA-376] - CLONE - Studies Search: Bug in Open cases From and To
• [MICA-378] - Preview Bug when adding content: project
• [MICA-381] - Onglet Methods quelque chose cocher n'apparaissent pas quand publier project Quebec Birth Cohort
• [MICA-382] - Onglet Methods quelque chose ecrit n'apparaisse pas en ligne quand 'published' study Quebec Birth Cohort
• [MICA-385] - Dans le section 'Participants Selection' un des mots manque un lettre majiscule
• [MICA-386] - Adding a new study (method section - Selection Criteria) : Please specify what other selection criteria, Order in preview
• [MICA-388] - CSS for Study view
• [MICA-389] - Terme mal ecrit en Anglais dans 'Create Study'/Methods/Sample Management/What are the biological samples collected?
• [MICA-390] - Dans Create Study/Methods/General Design/Study Registry Design il manque un ? dans What is the design of the study
• [MICA-391] - Mica Home sous Internet explorer: les onglets sont à la verticale
• [MICA-392] - Studies Search (Internet Explorer): Open cases for From and To and Go button appear under each other instead of beside each other
• [MICA-393] - Bouton "Search"
• [MICA-394] - Create a Study (Internet Explorer) : Onglets are not the same size.
• [MICA-395] - Faute Anglais dans Create Study/Status/Current Status/ Problem avec What are the stage and timeline of the study?
• [MICA-397] - When saving a new study (internet explorer): onglets view draft, edit draft and moderate are in vertical
• [MICA-398] - Edit Study : Les menus déroulant sont excessivement large
• [MICA-399] - Countries of residence (internet explorer) : la case selected options se retrouve en dessous
• [MICA-400] - IE a planté au moment de "Saver" un étude....
• [MICA-401] - Manque de ? dans Create Study/Methods/Participants Selection/ What are the inclusion criteria for participants' selection
• [MICA-402] - My workBench/Home (Internet Explorer) : Vertical Onglet: my content , create content, my draft, need review, my edit, all recent content
• [MICA-403] - Ajout d'un logo à une nouvelle étude (Internet Explorer) : le logo est un peu gros (au preview et à la publication)
• [MICA-404] - Mal ecrit en Anglais dans Create Study/Methods/Current number of collected biological samples from which DNA could be extracted/ In date of peut etre ecrit meiux
• [MICA-405] - Titre mal ecrit en Anglais dans Create Study/Methods/Current number of participants recruited at baseline/In date of
• [MICA-406] - Peut-etre faute orthographe dans Create Study/Access/'Is access to the following study features to external researchers or third parties provided or foreseen?
• [MICA-407] - Study edition logo & document are on the same line
• [MICA-408] - Rename title column to name for studies search

Improvement

• [MICA-93] - Allow conditional fields
• [MICA-210] - Display list of studies the same way in studies, a dataset or a project page
• [MICA-229] - Mica distribution
• [MICA-235] - Debian upgrade: displays xcompleted message as blue screen
• [MICA-236] - Core study catalog
• [MICA-315] - General Information - Text
• [MICA-316] - Studies Search - Les Max-Min en deux facettes... pas sur?
• [MICA-317] - Contenue du catalogue - Download Excel Format
• [MICA-318] - Modify the layout of the "help" fields
• [MICA-319] - Change layout of the presentation of a study
• [MICA-320] - Improve layout of study edition page
• [MICA-321] - Split the selection criteria in two sections, one section for regular ones and another for "specified" ones (age, gender, country...)
• [MICA-324] - Data Access: change yes-no-n/a to yes-no
• [MICA-325] - Change the status years of a study from a list to an open text
• [MICA-326] - On the study view page, have a view to show contacts and investigators instead of embedding nodes
• [MICA-327] - Have the the scrollbar set to overflow on the first fieldset when editing a study
• [MICA-328] - If using tabs when showing a study, the logo should be on all tabs
• [MICA-329] - Show most important facets first and move current search block
• [MICA-330] - Change string from "baseline design of the study" to "Study design"
• [MICA-331] - Make sure that the language flags are hidden, only links should be present
• [MICA-332] - "Methods" - corrections au texte dans l'interface de saisie
• [MICA-333] - Improve facet presentation
• [MICA-352] - Validate input in ranges facet (must be numeric)
• [MICA-373] - Section "Studies", Tableau des Studies, Colonne "Study Design": Remplacer les "Other" par la spécification
• [MICA-375] - Facette "Country" dans le "Studies Search" : Ordre alphabétique
• [MICA-377] - Description d'étude, Section "Access"
• [MICA-396] - Confusion dans le Study Form: Quand commence et quand arrête une question

New Feature

• [MICA-241] - Publication workflow

Task

• [MICA-232] - Upgrade Drupal core and module depedencies
• [MICA-234] - Update Mica 1.1 documentation with Facets upgrade
• [MICA-242] - Disable dataschema module
• [MICA-259] - Set Mica license to GPL3
• [MICA-292] - Configure new study catalog facet
• [MICA-294] - Authorization section in study form needs to be reviewed and translated
• [MICA-335] - Update Mica demo studies with new study fields
• [MICA-345] - Display study pubmed id as a link

Sub-task

• [MICA-237] - Merge study and study information content types
• [MICA-238] - Validate study catalog core fields
• [MICA-239] - Import pertinent DDI concepts
• [MICA-240] - Study catalog display
• [MICA-243] - Split project module to project and harmonization project
• [MICA-249] - Update study content type with new core fields
• [MICA-250] - Prepare Drupal to support new languages
• [MICA-253] - Adjust breadcrumbs for Events
• [MICA-257] - Mica relation does not support revision
• [MICA-258] - Remove Contact & Institution content types
• [MICA-264] - Translate mica_studies
• [MICA-265] - Translate mica_community
• [MICA-266] - Translate mica_data_access
• [MICA-267] - Translate mica_datasets
• [MICA-268] - Translate mica_datashield
• [MICA-269] - Translate mica_node_reference_field
• [MICA-270] - Translate mica_opal
• [MICA-271] - Translate mica_projects
• [MICA-272] - Translate node_reference_block
• [MICA-275] - Update Mica Demo feeds
• [MICA-277] - Add City to Investigatos & Contact Institution
• [MICA-285] - Update Study export view
• [MICA-379] - Les choses cocher dans le section Sample Managment n'apparaissent pas dans le bonne endroit. Project test Quebec Birth Cohort.
• [MICA-380] - Les choses cocher dans le section General Design n'appariasent pas . Project test Quebec Birth Cohort.