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Removed all of the excludes for the D7 version. They were left over from the D6 version and appear to no longer be needed. Hopefully they dont need to be brought back.
implement new hook method to allow external modules to change the default exclude/include paths. I considered this a bug because other modules couldnt modify the default paths.
Fix a Drupal 6 $base_url bug that doesnt allow https urls to be created with file_create_url() because base_url has no brains of it's own to detect https mode and change the $base_url accordingly.