Support for Drupal 7 is ending on 5 January 2025—it’s time to migrate to Drupal 10! Learn about the many benefits of Drupal 10 and find migration tools in our resource center.| Title | Status | Priority | Category | Version | Component | Replies |
Last updated |
Assigned to | Created |
|---|---|---|---|---|---|---|---|---|---|
| Conflict between Drupal table names and CHADO ones | Closed (outdated) | Normal | Bug report | 7.x-2.x-dev | Tripal Views | 17 | 7 years 3 weeks | laceysanderson | 9 years 3 months |
| Improper regex for loading FASTA files causes errors | Closed (outdated) | Normal | Bug report | 7.x-2.x-dev | Tripal CV | 2 | 7 years 3 weeks | 8 years 1 month | |
| chado_generate_var 'return_array' doesn't seem to work recursively | Closed (outdated) | Normal | Bug report | 7.x-2.x-dev | CORE | 2 | 7 years 3 weeks | 8 years 4 weeks | |
| Agricola Pub Importer doesn't work | Closed (outdated) | Critical | Bug report | 7.x-2.x-dev | Tripal Publication | 3 | 7 years 3 weeks | 7 years 9 months | |
| Genetic_code, so and frange PostgreSQL schemata ownership when using multi-chado instances | Closed (outdated) | Normal | Bug report | 7.x-2.x-dev | CORE | 3 | 7 years 3 weeks | 7 years 5 months | |
| Deafult CVs for properties wipes them out if wrong | Closed (won't fix) | Critical | Bug report | 7.x-2.x-dev | CORE | 4 | 7 years 3 weeks | 8 years 1 month | |
| On editing the gene pages the respective relationships from database were deleted | Closed (duplicate) | Critical | Bug report | 7.x-2.0 | Tripal Feature | 5 | 7 years 3 weeks | 8 years 9 months | |
| tripal_insert_cvterm() changes cvterm_id when term already exists w/ a different db:accession | Closed (fixed) | Major | Bug report | 7.x-2.x-dev | Tripal CV | 12 | 7 years 3 weeks | spficklin | 8 years 5 months |
| Job's view is not dynamic | Closed (outdated) | Normal | Bug report | 7.x-2.x-dev | CORE | 2 | 7 years 3 weeks | 7 years 4 months | |
| Job execution time | Closed (fixed) | Major | Bug report | 7.x-2.x-dev | CORE | 3 | 7 years 3 weeks | 7 years 10 months | |
| Editing a feature can delete all of its relationships | Closed (fixed) | Critical | Bug report | 7.x-2.x-dev | Tripal Feature | 11 | 7 years 3 weeks | 7 years 1 month | |
| Cancelled jobs can still have status running | Closed (fixed) | Normal | Bug report | 7.x-2.0 | CORE | 4 | 7 years 3 weeks | 7 years 4 months | |
| Fields settings #auto_attach | Closed (outdated) | Major | Bug report | 7.x-3.x-dev | CORE | 2 | 7 years 3 weeks | 7 years 10 months | |
| Node resource fields do not get migrated to the entity | Closed (fixed) | Normal | Bug report | 7.x-3.x-dev | CORE | 3 | 7 years 3 weeks | 7 years 11 months | |
| Issues with Chromosome Pages | Closed (won't fix) | Normal | Bug report | 7.x-2.x-dev | Tripal Feature | 3 | 7 years 3 weeks | spficklin | 8 years 2 months |
| Memory leak loading genomic data (GFF, Fasta) | Closed (cannot reproduce) | Major | Bug report | 7.x-2.x-dev | Tripal Feature | 6 | 7 years 3 weeks | 8 years 2 months | |
| Base table or view not found: 1146 Table 'drupal.pg_namespace' doesn't exist | Closed (cannot reproduce) | Critical | Bug report | 7.x-2.x-dev | CORE | 4 | 7 years 3 weeks | ntubioinfo | 8 years 4 months |
| DOI & ISSN entered twice on publication import | Closed (cannot reproduce) | Normal | Bug report | 7.x-2.x-dev | Tripal Publication | 2 | 7 years 3 weeks | 8 years 7 months | |
| Publish of new entity content slow | Closed (fixed) | Normal | Bug report | 7.x-3.x-dev | CORE | 3 | 7 years 3 weeks | 8 years 4 days | |
| Bulk Loader Memory Issues | Closed (outdated) | Major | Bug report | 6.x-1.1 | Documentation | 1 | 7 years 3 weeks | 10 years 10 months | |
| Linker table edit forms do not show up in entity edit form. | Closed (outdated) | Normal | Bug report | 7.x-3.x-dev | CORE | 3 | 7 years 3 weeks | 8 years 7 hours | |
| Tripal3 Chado text areas are broken. | Closed (fixed) | Normal | Bug report | 7.x-3.x-dev | CORE | 3 | 7 years 3 weeks | laceysanderson | 8 years 7 hours |
| Issues with upgrade of Chado v1.11 -> v1.2 -> v1.3 | Closed (outdated) | Normal | Bug report | 7.x-2.x-dev | CORE | 2 | 7 years 3 weeks | 7 years 10 months | |
| No drupal_write_record() in API functions | Closed (outdated) | Major | Bug report | 7.x-3.x-dev | CORE | 3 | 7 years 3 weeks | 7 years 10 months | |
| Pub Vocab Warning if not loaded | Closed (fixed) | Critical | Bug report | 7.x-2.x-dev | Tripal Publication | 3 | 7 years 3 weeks | 7 years 9 months | |
| GFF load Not null violation | Closed (fixed) | Normal | Bug report | 7.x-2.0 | Tripal Bulk Loader | 3 | 7 years 3 weeks | 7 years 5 months | |
| Warning: Theme is missing from the file system: tripal. | Closed (fixed) | Normal | Bug report | 7.x-2.0 | CORE | 5 | 7 years 1 month | 7 years 5 months | |
| Cross-schema Joins break External Chado Database support | Closed (fixed) | Major | Bug report | 7.x-2.x-dev | CORE | 25 | 7 years 5 months | 8 years 7 months | |
| 'access chado_db content' permission is undefined | Closed (fixed) | Normal | Bug report | 7.x-2.x-dev | Tripal DB | 6 | 7 years 7 months | 7 years 9 months | |
| Tripal v3 form validate | Closed (cannot reproduce) | Normal | Bug report | 7.x-3.x-dev | Tripal Organism | 2 | 7 years 10 months | 7 years 10 months | |
| Orphaned links are not cleaned up | Closed (fixed) | Normal | Bug report | 7.x-2.x-dev | CORE | 5 | 7 years 11 months | laceysanderson | 8 years 1 month |
| Tripal table prefixing makes assumptions on schema names. | Closed (duplicate) | Normal | Bug report | 7.x-2.x-dev | CORE | 4 | 8 years 1 day | 8 years 1 month | |
| syncing organism | Closed (cannot reproduce) | Normal | Bug report | 7.x-2.x-dev | Tripal Organism | 4 | 8 years 1 month | lzswjtu | 8 years 2 months |
| Error:Load Relationship ontology | Closed (fixed) | Critical | Bug report | 7.x-2.x-dev | Tripal CV | 9 | 8 years 2 months | 8 years 4 months | |
| problems with bulk loader data transformation admin and execution | Closed (fixed) | Normal | Bug report | 7.x-2.0 | Tripal Bulk Loader | 2 | 8 years 2 months | 8 years 9 months | |
| Can not remove a "Transform Data File Value Rules" having a same "Match Pattern" | Closed (fixed) | Minor | Bug report | 7.x-2.0 | Tripal Bulk Loader | 2 | 8 years 2 months | 8 years 10 months | |
| Bulk loader record type - select if duplicate defaults to checked | Closed (fixed) | Minor | Bug report | 7.x-2.0 | Tripal Bulk Loader | 3 | 8 years 2 months | laceysanderson | 8 years 9 months |
| Tripal Contact module has warning messages if Pub module not installed | Closed (fixed) | Normal | Bug report | 7.x-2.x-dev | Tripal Contact | 3 | 8 years 3 months | 8 years 8 months | |
| Sequence ontology obo file has moved | Closed (fixed) | Normal | Bug report | 7.x-2.x-dev | Tripal CV | 2 | 8 years 3 months | 8 years 8 months | |
| Update link to Sequence Ontology | Closed (duplicate) | Normal | Bug report | 7.x-2.x-dev | Tripal CV | 2 | 8 years 3 months | 8 years 7 months | |
| cannot add term:PATO:0000001 | Closed (duplicate) | Normal | Bug report | 7.x-2.x-dev | Tripal CV | 3 | 8 years 3 months | 8 years 4 months | |
| Job cancelled, yet start date set | Closed (fixed) | Major | Bug report | 7.x-2.x-dev | CORE | 2 | 8 years 3 months | 8 years 4 months | |
| Clean up of anlaysis extensions | Closed (fixed) | Normal | Bug report | 7.x-2.x-dev | CORE | 9 | 8 years 3 months | spficklin | 10 years 1 month |
| tripal_get_files_stream create directory error | Closed (cannot reproduce) | Normal | Bug report | 7.x-2.x-dev | CORE | 2 | 8 years 5 months | 8 years 10 months | |
| command line progress bar in bulk loader fails on some systems | Closed (fixed) | Minor | Bug report | 7.x-2.0 | Tripal Bulk Loader | 2 | 8 years 8 months | spficklin | 8 years 9 months |
| Memory Leaks: Clean-up of orphaned nodes | Closed (fixed) | Normal | Bug report | 7.x-2.0-rc1 | API | 3 | 8 years 11 months | spficklin | 8 years 11 months |
| Tripal Bulk Loader won't load if there is a missing value in a column | Closed (fixed) | Normal | Bug report | 7.x-2.x-dev | Documentation | 1 | 8 years 11 months | 10 years 10 months | |
| /admin/tripal/chado/tripal_feature times out when many rows in feature table | Closed (fixed) | Normal | Bug report | 7.x-2.x-dev | CORE | 8 | 8 years 11 months | laceysanderson | 9 years 3 weeks |
| Select list handlers break when additional arguments present for that table | Closed (fixed) | Major | Bug report | 7.x-2.x-dev | Tripal Views | 1 | 8 years 11 months | laceysanderson | 8 years 11 months |
| Default module directory creation on module instllation | Closed (fixed) | Normal | Bug report | 7.x-2.x-dev | CORE | 1 | 8 years 11 months | spficklin | 8 years 11 months |
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