Documenting this here since I spent way too long trying to figure it out:

If you want to include a unique ID in the path for a Paragraph bundle, use a path like this:

images/my_bundle/[paragraph:id]

and it will make sure that all filenames are retained (not changed to *_0, *_1, etc) (unless you upload the same file twice to the same paragraph bundle) by making paths like

/images/my_bundle/134/image.jpg

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