I'm seeing html entities when I hover over the logo image on sites using the Omega 3 theme. Here's what I think is happening.

In line 181 of omega theme's template.php, it creates a linked_logo_image link, running a check_plain on the title of the link:

        $vars['linked_logo_img'] = $vars['logo'] ? l($vars['logo_img'], '<front>', array('attributes' => array('rel' => 'home', 'title' => check_plain($vars['site_name'])), 'html' => TRUE)) : '';

However, the l function passes all attributes through drupal_attributes, which also runs a check_plain on the data:

function drupal_attributes(array $attributes = array()) {
  foreach ($attributes as $attribute => &$data) {
    $data = implode(' ', (array) $data);
    $data = $attribute . '="' . check_plain($data) . '"';
  }
  return $attributes ? ' ' . implode(' ', $attributes) : '';
}

This causes things like quotation marks to be double-encoded in the html, so that when visitors hover over the logo image, they will see for example "Bahá&#039;í" popping up instead of "Bahá'í". I believe the check_plain can just be removed from template.php as per the attached patch, resulting in properly encoded html entities in the page source, and correct titles for the end users.

Support from Acquia helps fund testing for Drupal Acquia logo