I an a bit new to theming in Drupal. I am modifying the base theme that comes with Zentropy and I just now noticed that the primary (main menu) and secondary menus (user menu) are hardcoded into the base theme. The primary menu is also not a drop down menu either which is a sever limitation to what I was looking to accomplish. =(

What is the correct way to correct that. These 2 areas should be regions so that we are not limited to what you decided should go there.

Go theme so far, but I really need this to be addressed.

Thanks guys!