If the entity reference field is based on a view, the views theming will show up in, for instance, the list of values in the filter pane. Here is a screenshot to demonstrate what I'm talking about.

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#3 Screen Shot 2012-08-25 at 9.22.18 AM.png26.6 KBdafeder
#1 entityreference-view_markup_remove-1754014-1.patch810 bytesdafeder
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dafeder’s picture

dafeder
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Location Philadelphia, PA
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entityreference-view_markup_remove-1754014-1.patch810 bytes

Here's an inelegant patch that does the job...

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dafeder
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Location Philadelphia, PA
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Status: Active » Needs review
dafeder’s picture

dafeder
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Location Philadelphia, PA
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Screen Shot 2012-08-25 at 9.22.18 AM.png26.6 KB

Hmm looks like I messed up the screenshot, here it goes again.

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amitaibu
Primary language Hebrew
Location Israel
CreditAttribution: amitaibu commented 
+++ b/views/entityreference_plugin_style.incundefined
@@ -56,7 +56,7 @@ class entityreference_plugin_style extends views_plugin_style {
+        $results[$values->{$id_field_alias}] = strip_tags(filter_xss_admin(preg_replace('/\s\s+/', ' ', str_replace("\n", '', $this->row_plugin->render($values)))));

Doesn't it strip the output of the view as-well?