It appears you are working in the "master" branch in git. You should really be working in a version specific branch. The most direct documentation on this is <a href="http://drupal.org/node/1127732">Moving from a master branch to a version branch.</a> For additional resources please see the documentation about <a href="http://drupal.org/node/1015226">release naming conventions</a> and <a href="http://drupal.org/node/1066342">creating a branch in git</a>.
Review of the master branch:
<ul>
<li>README.txt is missing, see the <a href="http://drupal.org/node/447604">guidelines for in-project documentation</a>.</li>
<li>Remove the translations folder, translations are done on http://localize.drupal.org</li>
<li>The "?>" PHP delimiter at the end of files is discouraged, see http://drupal.org/node/318#phptags
<code>
./jiscpm_zipfile.php
</code></li>
<li>./jiscpmtask/jiscpmtask.module: all functions should be prefixed with your module/theme name to avoid name clashes. See http://drupal.org/node/318#naming
<code>
function jsgantt_check_directory($form_element) {
</code></li>
<li>Bad line endings were found, always use unix style terminators. See http://drupal.org/coding-standards#indenting
<code>
./documentation/CHANGELOG.txt:                                          ASCII c program text, with no line terminators
documentation/_notes/dwsync.xml
icons/_notes/dwsync.xml
images/_notes/dwsync.xml
jiscpmattribute/_notes/dwsync.xml
jiscpmbca/_notes/dwsync.xml
jiscpmissue/_notes/dwsync.xml
jiscpmppr/_notes/dwsync.xml
jiscpmproject/_notes/dwsync.xml
jiscpmrfc/_notes/dwsync.xml
jiscpmrisk/_notes/dwsync.xml
jiscpmsr/_notes/dwsync.xml
jiscpmtask/_notes/dwsync.xml
jiscpmtask/jsgantt/_notes/dwsync.xml
jiscpmteam/_notes/dwsync.xml
translations/_notes/dwsync.xml
</code></li>
<li>Remove all old CVS $Id tags, they are not needed anymore.
<code>
documentation/INSTALL.txt:1:/* $Id: $ */
jiscpmtask/jiscpmtask.js:1:// $Id: $
jiscpmtask/jsgantt/README.txt:1:// $Id: README.txt,v 1.1.2.2 2009/07/02 09:08:53 magnity Exp $
jiscpmteam/jiscpmteam.info:1:; $Id: $
translations/de.po:1:# $Id: de.po,v 1.1.2.1 2009/02/19 23:35:40 derhasi Exp $
</code></li>
</ul>
<i>This automated report was generated with <a href="http://drupal.org/sandbox/klausi/1320008">PAReview.sh</a>, your friendly project application review script. You can also use the <a href="http://ventral.org/pareview">online version</a> to check your project. Get a <a href="http://drupal.org/node/1410826">review bonus</a> and we will come back to your application sooner.</i>