diff --git a/src/Config/FilteredStorage.php b/src/Config/FilteredStorage.php
index 824f4bb..9417579 100644
--- a/src/Config/FilteredStorage.php
+++ b/src/Config/FilteredStorage.php
@@ -202,14 +202,23 @@ class FilteredStorage implements FilteredStorageInterface {
    */
   public function createCollection($collection) {
     $filters = [];
-    foreach ($this->filters as $filter) {
+    foreach ($this->filters as $key => $filter) {
       $filter = $filter->filterCreateCollection($collection);
       if ($filter) {
-        $filters[] = $filter;
+        $filters[$key] = $filter;
       }
     }
 
-    return new static($this->storage->createCollection($collection), $filters);
+    $storage = $this->storage->createCollection($collection);
+    $filtered = new static($storage, $filters);
+
+    // Set the storage to all the filters.
+    foreach ($filters as $filter) {
+      $filter->setSourceStorage(new ReadOnlyStorage($storage));
+      $filter->setFilteredStorage($filtered);
+    }
+
+    return $filtered;
   }
 
   /**
diff --git a/src/Config/StorageFilterInterface.php b/src/Config/StorageFilterInterface.php
index e1154e6..ad2c38e 100644
--- a/src/Config/StorageFilterInterface.php
+++ b/src/Config/StorageFilterInterface.php
@@ -189,7 +189,8 @@ interface StorageFilterInterface {
    *
    * @return \Drupal\config_filter\Config\StorageFilterInterface|null
    *   Return a filter that should participate in the collection. This allows
-   *   filters to act on different collections.
+   *   filters to act on different collections. Note that a new instance of the
+   *   filter should be created rather than returning $this directly.
    */
   public function filterCreateCollection($collection);
 
diff --git a/src/Plugin/ConfigFilterBase.php b/src/Plugin/ConfigFilterBase.php
index 48d3975..c52133c 100644
--- a/src/Plugin/ConfigFilterBase.php
+++ b/src/Plugin/ConfigFilterBase.php
@@ -125,7 +125,7 @@ abstract class ConfigFilterBase extends PluginBase implements ConfigFilterInterf
    * {@inheritdoc}
    */
   public function filterCreateCollection($collection) {
-    return $this;
+    return clone $this;
   }
 
   /**